Using Case When Statements and Windows Size for Data Grouping in R

Assigning Groups Based on a Column Value Using Windows Size and Case When Statements

In this article, we will explore how to assign groups based on a column value in R using the case_when function from the tidyverse package. We’ll also discuss the concept of windows size and how it can be used to group data based on a specific column value.

Introduction

When working with grouped data, it’s often necessary to create categories or bins based on a specific variable. This can be done using various methods such as cut, factor, or case_when statements from the tidyverse package. In this article, we’ll focus on using case_when to assign groups based on a column value and discuss how to apply windows size to achieve the desired grouping.

Understanding the Problem

The problem presented in the Stack Overflow question involves assigning groups based on the val column of a dataset. The goal is to group rows based on the values in the val column, where each group corresponds to a specific range of values.

Let’s examine the data provided:

MarkerCHRvalPosition
112.101
212.1110
313.3320
413.5530
512.0640
622.031
723.0410
823.1020
923.0530
1022.9040

The expected output is a grouped dataset with three groups corresponding to the ranges of values in the val column.

Using Case When Statements

To achieve this grouping, we can use the case_when function from the tidyverse package. The case_when function allows us to specify multiple conditions and corresponding actions for each condition.

Let’s create a sample dataset in R using the provided data:

library(tidyverse)

# Create the dataset
test <- read_csv('sample.csv')

# Convert Position to integer type
test$Position <- as.integer(test$Position)

Next, we’ll use the case_when function to assign groups based on the values in the val column:

# Assign groups using case when statement
test %>% 
  mutate(group = case_when(
    val >= 20 & val <= 49 ~ 'Group 1',
    val >= 50 & val <= 69 ~ 'Group 2',
    val >= 70 & val <= 100 ~ 'Group 3'
  )) %>%
  group_by(group) 

This code will create three groups corresponding to the ranges of values in the val column.

Understanding Windows Size

In the context of data grouping, windows size refers to the number of rows or observations that are considered together when determining the group boundaries. This can be particularly useful when working with datasets where the group boundaries are not fixed or where there is a desire to capture subtle patterns in the data.

Let’s examine an example where we want to apply a window size of 3 to the val column:

# Apply a window size of 3 to the val column
test %>% 
  mutate(group = case_when(
    rollup(val, 3) >= 20 & rollup(val, 3) <= 49 ~ 'Group 1',
    rollup(val, 3) >= 50 & rollup(val, 3) <= 69 ~ 'Group 2',
    rollup(val, 3) >= 70 & rollup(val, 3) <= 100 ~ 'Group 3'
  )) %>%
  group_by(group)

In this example, the rollup function is used to calculate the average value of the val column over a window size of 3. This allows us to capture patterns in the data that may not be apparent when using fixed group boundaries.

Conclusion

Assigning groups based on a column value can be a useful technique for summarizing and analyzing datasets. By leveraging the case_when function from the tidyverse package, we can create flexible and powerful grouping schemes tailored to our specific use case. Additionally, applying windows size can provide valuable insights into the data patterns and help us capture subtle relationships between variables.

We hope this article has provided a comprehensive overview of how to assign groups based on a column value using case_when statements and windows size.


Last modified on 2023-10-25